miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|299520189|gb|GT221477.1|GT221477 ACCTGAGGGACGTCATCGTCCAGCACCAGTGCGTCCCTTTCCGTCGCTACAACGGCGGCGTCGGCAGGTGTGCCCAGGCC
AAACAGTTCGGCTGGACTCAGGGACGCTGGCCCAAGAAGAGCGCCGAGTTCCTCCTGCACATGCTGAAGAACGCCGAGAG
CAACGCTGAGCTCAAGGGTCTGGACGTGGACTCTCTGGTCATCGAGCACATCCAGGTCAACAAGGCTCCCAAGATGAGGA
GGCGTACGTACATGCATACTGTGTGAGAATGTGTGCATGTGTGTGCGTGTGTGTGTGTTTTGTGCATGTTAGCAGGCTGA
CAGACCTGTTCCAAACAGGTGTGTATCGCCTGTAAACAGAATTTATTTTGCAGCACACGTGCTGACGCAGACACACACTG
ATATTGAAACCAGAAGCTGAACTCTGTCTCAAGCTCAGCACACGCACGCACACATACACACACACGT




Most similar to sp|P18621|RL17_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P18621|RL17_HUMAN 60S ribosomal protein L17 OS=Homo sapiens
           GN=RPL17 PE=1 SV=3
          Length = 184

 Score =  166 bits (419), Expect = 7e-41
 Identities = 78/83 (93%), Positives = 81/83 (97%)
 Frame = +3

Query: 3   LRDVIVQHQCVPFRRYNGGVGRCAQAKQFGWTQGRWPKKSAEFLLHMLKNAESNAELKGL 182
           L+DV +Q QCVPFRRYNGGVGRCAQAKQ+GWTQGRWPKKSAEFLLHMLKNAESNAELKGL
Sbjct: 48  LKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGL 107

Query: 183 DVDSLVIEHIQVNKAPKMRRRTY 251
           DVDSLVIEHIQVNKAPKMRRRTY
Sbjct: 108 DVDSLVIEHIQVNKAPKMRRRTY 130